Publications

Berrios, D.C., Beheshti, A., Costes, S. V., (2018) FAIRness and Usability for Open-access Omics Data Systems, AMIA Annu Symp Proc. Dec 5;2018:232-241. eCollection 2018.

Ray, S., Gebre, S., Fogle, H., Berrios, D. C., Tran, P. B., Galazka, J. G., Costes, S. V., (2019). GeneLab: Omics database for spaceflight experiments. Bioinformatics, 35(10), 1753–1759, doi:10.1093/bioinformatics/bty884

Beheshti, A., McDonald, J. T., Miller, J., Grabham, P., Costes, S. C., (2019). GeneLab Database Analyses Suggest Long-Term Impact of Space Radiation on the Cardiovascular System by the Activation of FYN Through Reactive Oxygen Species.Int. J. Mol. Sci,. 20(3), 661; doi.org/10.3390/ijms20030661

Datasets: GLDS-52, GLDS-109, GLDS-117

Beheshti, A., Shirazi-Fard, Y., Choi, S., Berrios, D., Gebre, S. G., Galazaka, J. M., Costes, S.V., (2019). Exploring the Effects of Spaceflight on Mouse Physiology using the Open Access NASA GeneLab Data Platform. J. Vis. Exp.(143) e58447, doi: 10.3791/58447

Kamal, K. Y., Herranz, R., van Loon, J., Medina, F. J., Herranz (2019). Differential transcriptional profile through cell cycle progression in Arabidopsis cultures under simulated gravity. ScienceDirect, doi.org/10.1016/j.ygeno.2019.01.007

Dataset: GLDS-144

Morrison, M.D., Fajardo-Cavazos, P., Nicholson, W., (2019). Comparison of Bacillus subtilis transcriptome profiles from two separate missions to the International Space Station. npj Microgravity 5, Article number:1

Datasets: GLDS-185, GLDS-145, GLDS-138

Morrison, D., Fajardo-Cavozos, P., Nicholson, W. L., (2019). Comparison of Bacillus subtilis transcriptome profiles from two separate missions to the International Space Station. npj Microgravity 5, Article number: 1, doi.org/10.1038/s41526-018-0061-0

Datasets: GLDS-208, GLDS-210

Choi, W. G., Barker, R. J., Kim, S. H., Swanson, S. J., & Gilroy, S. (2019). Variation in the transcriptome of different ecotypes of Arabidopsis thaliana reveals signatures of oxidative stress in plant responses to spaceflight. Am J Bot, 106(1), 123-136. doi:10.1002/ajb2.1223

Dataset: GLDS-37

Rettig, T. A., Bye, B. A., Nishiyama, N. C., Hlavacek, S., Ward, C., Pecaut, M. J., & Chapes, S. K. (2019). Effects of skeletal unloading on the antibody repertoire of tetanus toxoid and/or CpG treated C57BL/6J mice. PLoS One, 14(1), e0210284. doi:10.1371/journal.pone.0210284

Dataset: GLDS-201

Be, N. A., Avila-Herrera, A., Allen, J. E., Singh, N., Sielaff, A. C., Jaing, C., & Venkateswaran, K. (2017). Whole meta genome profiles of particulates collected from the International Space Station. Microbiome, 5:81, doi.org/10.1186/s40168-017-0292-4

Dataset: GLDS-64